Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.84□□□□□ -0.19
Capn1O35350 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Capn1O35350 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Capn1O35350 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Capn1O35350 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Capn1O35350 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.84□□□□□ -0.19
Capn1O35350 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Capn1O35350 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Capn1O35350 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Capn1O35350 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Capn1O35350 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Capn1O35350 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Capn1O35350 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Capn1O35350 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Capn1O35350 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Capn1O35350 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Gm5177-201ENSMUST00000183092 997 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Capn1O35350 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.83□□□□□ -0.2
Capn1O35350 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.83□□□□□ -0.2
Capn1O35350 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Capn1O35350 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Capn1O35350 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Capn1O35350 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Capn1O35350 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Capn1O35350 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.82□□□□□ -0.2
Capn1O35350 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Capn1O35350 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.82□□□□□ -0.2
Capn1O35350 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.82□□□□□ -0.2
Capn1O35350 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Capn1O35350 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Capn1O35350 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Capn1O35350 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Capn1O35350 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Capn1O35350 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.81□□□□□ -0.2
Capn1O35350 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Capn1O35350 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms