Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gm11452-201ENSMUST00000122376 690 ntBASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Mir8098-201ENSMUST00000184011 137 ntBASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh9F8VPK8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm7222-201ENSMUST00000117512 906 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm28659-201ENSMUST00000188013 759 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gm5864-201ENSMUST00000202263 970 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh9F8VPK8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh9F8VPK8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh9F8VPK8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms