Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc188F6WEU2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Gm19184-201ENSMUST00000196798 928 ntBASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Gm45098-201ENSMUST00000207179 657 ntBASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc188F6WEU2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm12928-201ENSMUST00000117115 573 ntBASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm13342-201ENSMUST00000121055 207 ntBASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm27341-201ENSMUST00000183570 106 ntBASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Gm43138-201ENSMUST00000199123 708 ntBASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc188F6WEU2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Gm7593-201ENSMUST00000187246 644 ntBASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 AU022133-201ENSMUST00000200601 873 ntBASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Gm19309-201ENSMUST00000218295 205 ntBASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc188F6WEU2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms