Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tarbp1E9Q368 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Gm10766-202ENSMUST00000194123 606 ntBASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Gm9797-201ENSMUST00000052902 613 ntBASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tarbp1E9Q368 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 AC132467.2-202ENSMUST00000227726 559 ntBASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.69■□□□□ 0.9
Tarbp1E9Q368 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Gm37917-201ENSMUST00000194711 392 ntBASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Gm15163-201ENSMUST00000120749 1302 ntBASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Ldha-ps-201ENSMUST00000119390 995 ntBASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Gm28760-201ENSMUST00000185995 736 ntBASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 AC121598.1-201ENSMUST00000228224 1019 ntBASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tarbp1E9Q368 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Gm6916-202ENSMUST00000205523 195 ntBASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tarbp1E9Q368 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Gm31326-201ENSMUST00000191856 1048 ntBASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tarbp1E9Q368 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms