Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Syce3B5KM66 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Syce3B5KM66 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.1■□□□□ 0.33
Syce3B5KM66 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.1■□□□□ 0.33
Syce3B5KM66 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Syce3B5KM66 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syce3B5KM66 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Syce3B5KM66 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syce3B5KM66 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Syce3B5KM66 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Syce3B5KM66 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Syce3B5KM66 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syce3B5KM66 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Gm9013-201ENSMUST00000132939 882 ntBASIC17.08■□□□□ 0.32
Syce3B5KM66 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Gm18622-201ENSMUST00000219361 595 ntBASIC17.08■□□□□ 0.32
Syce3B5KM66 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Syce3B5KM66 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Syce3B5KM66 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Syce3B5KM66 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Gm15794-201ENSMUST00000120182 631 ntBASIC17.07■□□□□ 0.32
Syce3B5KM66 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.07■□□□□ 0.32
Syce3B5KM66 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.07■□□□□ 0.32
Syce3B5KM66 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syce3B5KM66 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms