Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Mir1894-201ENSMUST00000122802 81 ntBASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.11■□□□□ 0.01
Col4a6B1AVK5 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a6B1AVK5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col4a6B1AVK5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm28911-201ENSMUST00000188837 117 ntBASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm8463-201ENSMUST00000208573 613 ntBASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a6B1AVK5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Col4a6B1AVK5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a6B1AVK5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a6B1AVK5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a6B1AVK5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a6B1AVK5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a6B1AVK5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a6B1AVK5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.08■□□□□ 0
Col4a6B1AVK5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a6B1AVK5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col4a6B1AVK5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms