Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm9172-201ENSMUST00000212092 954 ntBASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv3A0A0A6YYE2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm13168-201ENSMUST00000121771 632 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm21559-201ENSMUST00000220638 855 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm8587-201ENSMUST00000076538 843 ntBASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv3A0A0A6YYE2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv3A0A0A6YYE2 Gm8318-201ENSMUST00000182954 872 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms