Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm24589-201ENSMUST00000116692 94 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm34391-201ENSMUST00000203706 907 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav21-dv12A0A075B6C4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Celf4-206ENSMUST00000224553 1729 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm27459-201ENSMUST00000184860 107 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm6089-201ENSMUST00000197666 938 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Gm6376-201ENSMUST00000209407 580 ntBASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav21-dv12A0A075B6C4 Birc2-201ENSMUST00000054878 378 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms