Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm43767-201ENSMUST00000198933 381 ntBASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6-4A0A075B6B4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav6-4A0A075B6B4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Gm12260-201ENSMUST00000122447 411 ntBASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Gm9727-201ENSMUST00000161387 555 ntBASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav6-4A0A075B6B4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Gm43514-201ENSMUST00000198852 424 ntBASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6-4A0A075B6B4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms