Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8n-2A0A075B633 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm14127-201ENSMUST00000117906 678 ntBASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm15653-201ENSMUST00000119247 907 ntBASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Shd-206ENSMUST00000225145 998 ntBASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trav8n-2A0A075B633 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8n-2A0A075B633 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav8n-2A0A075B633 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8n-2A0A075B633 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8n-2A0A075B633 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms