Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm43125-201ENSMUST00000201724 730 ntBASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-1A0A075B5Z7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm25287-201ENSMUST00000103846 110 ntBASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm22918-201ENSMUST00000103855 110 ntBASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-1A0A075B5Z7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm2810-201ENSMUST00000118681 990 ntBASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-1A0A075B5Z7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms