Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.65□□□□□ -0.54
CcsQ9WU84 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.65□□□□□ -0.54
CcsQ9WU84 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CcsQ9WU84 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CcsQ9WU84 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.65□□□□□ -0.55
CcsQ9WU84 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CcsQ9WU84 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CcsQ9WU84 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CcsQ9WU84 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.65□□□□□ -0.55
CcsQ9WU84 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CcsQ9WU84 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.64□□□□□ -0.55
CcsQ9WU84 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CcsQ9WU84 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CcsQ9WU84 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CcsQ9WU84 Gm27357-201ENSMUST00000183754 135 ntBASIC11.64□□□□□ -0.55
CcsQ9WU84 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CcsQ9WU84 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CcsQ9WU84 Rubie-203ENSMUST00000227803 2430 ntBASIC11.64□□□□□ -0.55
CcsQ9WU84 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Gm9103-201ENSMUST00000119371 405 ntBASIC11.63□□□□□ -0.55
CcsQ9WU84 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Gm27742-201ENSMUST00000184667 60 ntBASIC11.63□□□□□ -0.55
CcsQ9WU84 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.63□□□□□ -0.55
CcsQ9WU84 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.63□□□□□ -0.55
CcsQ9WU84 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CcsQ9WU84 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.63□□□□□ -0.55
CcsQ9WU84 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.63□□□□□ -0.55
CcsQ9WU84 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
CcsQ9WU84 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CcsQ9WU84 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CcsQ9WU84 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CcsQ9WU84 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Gm17807-201ENSMUST00000186869 298 ntBASIC11.62□□□□□ -0.55
CcsQ9WU84 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CcsQ9WU84 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms