Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Msh5Q9QUM7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm7153-201ENSMUST00000117092 455 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm5264-201ENSMUST00000190584 848 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm45359-201ENSMUST00000210635 427 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Msh5Q9QUM7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Grk6-207ENSMUST00000225925 2769 ntBASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Gm12752-201ENSMUST00000121657 811 ntBASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.4■□□□□ 0.06
Msh5Q9QUM7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.4■□□□□ 0.06
Msh5Q9QUM7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Msh5Q9QUM7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh5Q9QUM7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms