Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Gm27389-201ENSMUST00000183622 195 ntBASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4bQ9ES00 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.39□□□□□ -0.11
Ube4bQ9ES00 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.38□□□□□ -0.11
Ube4bQ9ES00 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ube4bQ9ES00 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube4bQ9ES00 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms