Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lima1Q9ERG0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Lima1Q9ERG0 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Lima1Q9ERG0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.77□□□□□ -0.05
Lima1Q9ERG0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Lima1Q9ERG0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Lima1Q9ERG0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms