Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Prob1-201ENSMUST00000097619 3021 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Gm29667-201ENSMUST00000190817 490 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Gm45098-201ENSMUST00000207179 657 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nip7Q9CXK8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Gm46209-201ENSMUST00000217912 553 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Gm6218-201ENSMUST00000219812 628 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nip7Q9CXK8 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm13464-201ENSMUST00000119418 935 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm29310-201ENSMUST00000185468 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21825-201ENSMUST00000185728 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm29109-201ENSMUST00000185895 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21896-201ENSMUST00000186520 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21873-201ENSMUST00000186728 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21794-201ENSMUST00000187056 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21880-201ENSMUST00000187275 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21826-201ENSMUST00000187451 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21198-201ENSMUST00000188393 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21749-201ENSMUST00000189343 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21901-201ENSMUST00000189568 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm29424-201ENSMUST00000189716 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm28599-201ENSMUST00000189838 694 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21867-201ENSMUST00000189917 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm29269-201ENSMUST00000190087 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21722-201ENSMUST00000190153 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm28423-201ENSMUST00000190701 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21899-201ENSMUST00000190745 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21910-201ENSMUST00000191163 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21849-201ENSMUST00000191571 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm28678-201ENSMUST00000191593 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm20910-201ENSMUST00000193268 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm21871-201ENSMUST00000194621 696 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Gm9794-201ENSMUST00000202370 423 ntBASIC18.49■□□□□ 0.55
Nip7Q9CXK8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nip7Q9CXK8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms