Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ddx28Q9CWT6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ddx28Q9CWT6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx28Q9CWT6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Gm4459-201ENSMUST00000118750 468 ntBASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Gm17971-201ENSMUST00000190239 806 ntBASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx28Q9CWT6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14□□□□□ -0.17
Ddx28Q9CWT6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx28Q9CWT6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx28Q9CWT6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms