Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Otud1Q9CUB6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gm16026-204ENSMUST00000162652 683 ntBASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.12□□□□□ -0.15
Otud1Q9CUB6 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Asic1-205ENSMUST00000228185 1818 ntBASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Otud1Q9CUB6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Gm15483-201ENSMUST00000120338 456 ntBASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Otud1Q9CUB6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Gm14701-201ENSMUST00000117156 348 ntBASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Rprl2-201ENSMUST00000157150 290 ntBASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Gm18889-201ENSMUST00000174284 929 ntBASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.1□□□□□ -0.15
Otud1Q9CUB6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.1□□□□□ -0.15
Otud1Q9CUB6 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms