Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim8Q99PJ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim8Q99PJ2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim8Q99PJ2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gm8344-201ENSMUST00000119813 856 ntBASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trim8Q99PJ2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms