Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfc4Q99J62 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfc4Q99J62 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.16■□□□□ 0.34
Rfc4Q99J62 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfc4Q99J62 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Rfc4Q99J62 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.15■□□□□ 0.34
Rfc4Q99J62 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.15■□□□□ 0.34
Rfc4Q99J62 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.15■□□□□ 0.34
Rfc4Q99J62 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfc4Q99J62 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfc4Q99J62 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfc4Q99J62 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rfc4Q99J62 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rfc4Q99J62 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfc4Q99J62 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfc4Q99J62 Gm7653-201ENSMUST00000214567 508 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms