Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gm13418-201ENSMUST00000119097 944 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gm6089-201ENSMUST00000197666 938 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga11Q91XY8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga11Q91XY8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhga11Q91XY8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm44357-201ENSMUST00000195897 142 ntBASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm19658-201ENSMUST00000196231 138 ntBASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm44367-201ENSMUST00000196836 138 ntBASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm44350-201ENSMUST00000197197 138 ntBASIC14.44□□□□□ -0.1
Pcdhga11Q91XY8 Gm44390-201ENSMUST00000197533 144 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms