Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.06■□□□□ 0.32
Trex1Q91XB0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm23547-201ENSMUST00000158210 271 ntBASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm27680-201ENSMUST00000184192 160 ntBASIC17.06■□□□□ 0.32
Trex1Q91XB0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trex1Q91XB0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Gm9719-201ENSMUST00000162765 543 ntBASIC17.05■□□□□ 0.32
Trex1Q91XB0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Gm44344-201ENSMUST00000200287 129 ntBASIC17.05■□□□□ 0.32
Trex1Q91XB0 Gm5186-201ENSMUST00000218781 920 ntBASIC17.05■□□□□ 0.32
Trex1Q91XB0 Gm7775-201ENSMUST00000218871 853 ntBASIC17.05■□□□□ 0.32
Trex1Q91XB0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trex1Q91XB0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Gm5566-201ENSMUST00000116118 459 ntBASIC17.04■□□□□ 0.32
Trex1Q91XB0 Gm15487-201ENSMUST00000122373 465 ntBASIC17.04■□□□□ 0.32
Trex1Q91XB0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trex1Q91XB0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.03■□□□□ 0.32
Trex1Q91XB0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Gm24543-201ENSMUST00000103867 82 ntBASIC17.03■□□□□ 0.32
Trex1Q91XB0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Gm45098-201ENSMUST00000207179 657 ntBASIC17.03■□□□□ 0.32
Trex1Q91XB0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trex1Q91XB0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trex1Q91XB0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.02■□□□□ 0.32
Trex1Q91XB0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms