Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Top1mtQ8R4U6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Gm14140-201ENSMUST00000119999 995 ntBASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Psmb5-202ENSMUST00000227257 622 ntBASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Top1mtQ8R4U6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Top1mtQ8R4U6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Top1mtQ8R4U6 Gm1401-201ENSMUST00000122048 772 ntBASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Top1mtQ8R4U6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Top1mtQ8R4U6 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms