Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pspc1Q8R326 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.16■□□□□ 0.34
Pspc1Q8R326 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.16■□□□□ 0.34
Pspc1Q8R326 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pspc1Q8R326 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pspc1Q8R326 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm15483-201ENSMUST00000120338 456 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gm5779-201ENSMUST00000218467 910 ntBASIC17.15■□□□□ 0.34
Pspc1Q8R326 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pspc1Q8R326 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
Pspc1Q8R326 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pspc1Q8R326 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.14■□□□□ 0.33
Pspc1Q8R326 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Gm38225-201ENSMUST00000194001 393 ntBASIC17.14■□□□□ 0.33
Pspc1Q8R326 Gm20949-201ENSMUST00000206478 952 ntBASIC17.14■□□□□ 0.33
Pspc1Q8R326 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.14■□□□□ 0.33
Pspc1Q8R326 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.14■□□□□ 0.33
Pspc1Q8R326 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pspc1Q8R326 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pspc1Q8R326 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms