Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.69■□□□□ 0.42
Cchcr1Q8K2I2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Gm6550-201ENSMUST00000187574 993 ntBASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.68■□□□□ 0.42
Cchcr1Q8K2I2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cchcr1Q8K2I2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Gm15173-201ENSMUST00000122049 433 ntBASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cchcr1Q8K2I2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cchcr1Q8K2I2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms