Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smc5Q8CG46 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc5Q8CG46 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc5Q8CG46 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gm37153-201ENSMUST00000193637 231 ntBASIC18.49■□□□□ 0.55
Smc5Q8CG46 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gm18669-201ENSMUST00000216049 778 ntBASIC18.49■□□□□ 0.55
Smc5Q8CG46 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smc5Q8CG46 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.48■□□□□ 0.55
Smc5Q8CG46 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.48■□□□□ 0.55
Smc5Q8CG46 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smc5Q8CG46 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Gm14859-201ENSMUST00000117752 357 ntBASIC18.47■□□□□ 0.55
Smc5Q8CG46 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smc5Q8CG46 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Gm25990-201ENSMUST00000102440 86 ntBASIC18.46■□□□□ 0.55
Smc5Q8CG46 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.46■□□□□ 0.55
Smc5Q8CG46 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms