Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc38Q8CDN8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Gm15173-201ENSMUST00000122049 433 ntBASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc38Q8CDN8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Gm7787-201ENSMUST00000216858 688 ntBASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc38Q8CDN8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Gm45167-201ENSMUST00000208007 322 ntBASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc38Q8CDN8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc38Q8CDN8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms