Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim4Q8C1Q6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Gm10499-201ENSMUST00000174094 934 ntBASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim4Q8C1Q6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim4Q8C1Q6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim4Q8C1Q6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim4Q8C1Q6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms