Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sh3rf3Q8C120 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Sh3rf3Q8C120 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf3Q8C120 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf3Q8C120 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sh3rf3Q8C120 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sh3rf3Q8C120 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Gm18733-201ENSMUST00000173950 856 ntBASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf3Q8C120 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf3Q8C120 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf3Q8C120 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms