Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.41■□□□□ 0.06
Trub1Q8C0D0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trub1Q8C0D0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trub1Q8C0D0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trub1Q8C0D0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Gm14140-201ENSMUST00000119999 995 ntBASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.38■□□□□ 0.05
Trub1Q8C0D0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms