Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdhr3Q8BL00 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm12644-201ENSMUST00000119935 606 ntBASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm33142-201ENSMUST00000193913 867 ntBASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gm6296-201ENSMUST00000222599 943 ntBASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdhr3Q8BL00 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdhr3Q8BL00 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdhr3Q8BL00 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms