Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm12134-201ENSMUST00000122109 520 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm5682-201ENSMUST00000173402 505 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm9682-201ENSMUST00000197505 556 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn3Q8BHH8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clrn3Q8BHH8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clrn3Q8BHH8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms