Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.44■□□□□ 0.06
Trim62Q80V85 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.44■□□□□ 0.06
Trim62Q80V85 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trim62Q80V85 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.44■□□□□ 0.06
Trim62Q80V85 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.44■□□□□ 0.06
Trim62Q80V85 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim62Q80V85 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim62Q80V85 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm9385-201ENSMUST00000117563 472 ntBASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm6736-201ENSMUST00000166583 948 ntBASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm27494-201ENSMUST00000184735 189 ntBASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.43■□□□□ 0.06
Trim62Q80V85 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim62Q80V85 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim62Q80V85 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim62Q80V85 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim62Q80V85 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim62Q80V85 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms