Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21Q78T54 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.19□□□□□ -0.46
Vma21Q78T54 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Gm12644-201ENSMUST00000119935 606 ntBASIC12.19□□□□□ -0.46
Vma21Q78T54 Gm12134-201ENSMUST00000122109 520 ntBASIC12.19□□□□□ -0.46
Vma21Q78T54 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.19□□□□□ -0.46
Vma21Q78T54 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vma21Q78T54 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vma21Q78T54 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.18□□□□□ -0.46
Vma21Q78T54 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm12895-201ENSMUST00000122214 226 ntBASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.18□□□□□ -0.46
Vma21Q78T54 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.18□□□□□ -0.46
Vma21Q78T54 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vma21Q78T54 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.18□□□□□ -0.46
Vma21Q78T54 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vma21Q78T54 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.18□□□□□ -0.46
Vma21Q78T54 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.18□□□□□ -0.46
Vma21Q78T54 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vma21Q78T54 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vma21Q78T54 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vma21Q78T54 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Vma21Q78T54 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms