Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Snrnp40Q6PE01 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Snrnp40Q6PE01 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Snrnp40Q6PE01 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Snrnp40Q6PE01 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Snrnp40Q6PE01 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gm6912-201ENSMUST00000117218 544 ntBASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gm14042-201ENSMUST00000120139 833 ntBASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gm18018-201ENSMUST00000198273 408 ntBASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gm16476-201ENSMUST00000221544 139 ntBASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Celf4-206ENSMUST00000224553 1729 ntBASIC13.08□□□□□ -0.32
Snrnp40Q6PE01 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm12138-201ENSMUST00000122180 951 ntBASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm12091-201ENSMUST00000146791 830 ntBASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm42612-201ENSMUST00000197986 623 ntBASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm43170-201ENSMUST00000199827 612 ntBASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Snrnp40Q6PE01 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Snrnp40Q6PE01 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms