Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abcf1Q6P542 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.74■□□□□ 0.27
Abcf1Q6P542 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.74■□□□□ 0.27
Abcf1Q6P542 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Gm6296-201ENSMUST00000222599 943 ntBASIC16.74■□□□□ 0.27
Abcf1Q6P542 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abcf1Q6P542 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Gm19164-201ENSMUST00000210667 640 ntBASIC16.73■□□□□ 0.27
Abcf1Q6P542 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abcf1Q6P542 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.72■□□□□ 0.27
Abcf1Q6P542 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abcf1Q6P542 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.71■□□□□ 0.27
Abcf1Q6P542 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.71■□□□□ 0.27
Abcf1Q6P542 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abcf1Q6P542 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Gm23547-201ENSMUST00000158210 271 ntBASIC16.71■□□□□ 0.27
Abcf1Q6P542 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Abcf1Q6P542 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms