Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Hdac4Q6NZM9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.71■□□□□ 0.26
Hdac4Q6NZM9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Gm14140-201ENSMUST00000119999 995 ntBASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hdac4Q6NZM9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Gm2272-201ENSMUST00000194903 582 ntBASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hdac4Q6NZM9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Psmb5-202ENSMUST00000227257 622 ntBASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hdac4Q6NZM9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms