Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.94□□□□□ -0.18
AtmQ62388 Gm14723-201ENSMUST00000118686 215 ntBASIC13.94□□□□□ -0.18
AtmQ62388 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.94□□□□□ -0.18
AtmQ62388 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AtmQ62388 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.93□□□□□ -0.18
AtmQ62388 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Mir8109-201ENSMUST00000184375 117 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Gm18056-201ENSMUST00000207670 568 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Gm18061-201ENSMUST00000208350 562 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Gm18063-201ENSMUST00000208529 568 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Gm18052-201ENSMUST00000208750 559 ntBASIC13.93□□□□□ -0.18
AtmQ62388 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.93□□□□□ -0.18
AtmQ62388 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.93□□□□□ -0.18
AtmQ62388 Gm9229-201ENSMUST00000222777 126 ntBASIC13.93□□□□□ -0.18
AtmQ62388 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
AtmQ62388 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AtmQ62388 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AtmQ62388 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.93□□□□□ -0.18
AtmQ62388 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Gm13350-201ENSMUST00000120519 479 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.92□□□□□ -0.18
AtmQ62388 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.92□□□□□ -0.18
AtmQ62388 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AtmQ62388 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AtmQ62388 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
AtmQ62388 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.92□□□□□ -0.18
AtmQ62388 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
AtmQ62388 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AtmQ62388 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.92□□□□□ -0.18
AtmQ62388 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AtmQ62388 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.92□□□□□ -0.18
AtmQ62388 Gm28911-201ENSMUST00000188837 117 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Gm45453-201ENSMUST00000211758 853 ntBASIC13.92□□□□□ -0.18
AtmQ62388 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AtmQ62388 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AtmQ62388 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AtmQ62388 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.91□□□□□ -0.18
AtmQ62388 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AtmQ62388 Gm27631-201ENSMUST00000184163 466 ntBASIC13.91□□□□□ -0.18
AtmQ62388 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.91□□□□□ -0.18
AtmQ62388 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AtmQ62388 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms