Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.53□□□□□ -0.4
SspnQ62147 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.53□□□□□ -0.4
SspnQ62147 Gm6296-201ENSMUST00000222599 943 ntBASIC12.53□□□□□ -0.4
SspnQ62147 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SspnQ62147 Gm10355-201ENSMUST00000097146 517 ntBASIC12.53□□□□□ -0.4
SspnQ62147 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SspnQ62147 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SspnQ62147 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SspnQ62147 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SspnQ62147 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
SspnQ62147 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.53□□□□□ -0.4
SspnQ62147 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SspnQ62147 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SspnQ62147 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SspnQ62147 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SspnQ62147 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SspnQ62147 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.52□□□□□ -0.41
SspnQ62147 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SspnQ62147 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Gm8318-201ENSMUST00000182954 872 ntBASIC12.52□□□□□ -0.41
SspnQ62147 Gm27646-201ENSMUST00000183989 110 ntBASIC12.52□□□□□ -0.41
SspnQ62147 Gm43347-201ENSMUST00000200226 580 ntBASIC12.52□□□□□ -0.41
SspnQ62147 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.52□□□□□ -0.41
SspnQ62147 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SspnQ62147 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Gm9103-201ENSMUST00000119371 405 ntBASIC12.51□□□□□ -0.41
SspnQ62147 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
SspnQ62147 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.51□□□□□ -0.41
SspnQ62147 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.51□□□□□ -0.41
SspnQ62147 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
SspnQ62147 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.51□□□□□ -0.41
SspnQ62147 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.51□□□□□ -0.41
SspnQ62147 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SspnQ62147 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SspnQ62147 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms