Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Mir1897-201ENSMUST00000122581 272 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Gm16215-201ENSMUST00000161990 637 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Gm46209-201ENSMUST00000217912 553 ntBASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scaf1Q5U4C3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Gm5745-201ENSMUST00000183748 313 ntBASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scaf1Q5U4C3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scaf1Q5U4C3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Gm4875-201ENSMUST00000118257 786 ntBASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scaf1Q5U4C3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.38■□□□□ 0.69
Scaf1Q5U4C3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scaf1Q5U4C3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms