Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.61□□□□□ -0.07
Vps13aQ5H8C4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Gm37259-201ENSMUST00000193903 849 ntBASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Gm7399-201ENSMUST00000032395 858 ntBASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps13aQ5H8C4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Gm27516-201ENSMUST00000184237 98 ntBASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Gm10012-201ENSMUST00000078252 192 ntBASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13aQ5H8C4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13aQ5H8C4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Vps13aQ5H8C4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13aQ5H8C4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13aQ5H8C4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13aQ5H8C4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13aQ5H8C4 Gm9823-201ENSMUST00000051212 327 ntBASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms