Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf20Q5DTM8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Mzt1-203ENSMUST00000227948 952 ntBASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf20Q5DTM8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Gm18733-201ENSMUST00000173950 856 ntBASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Gm27300-201ENSMUST00000184085 97 ntBASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Gm27335-201ENSMUST00000184758 97 ntBASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf20Q5DTM8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf20Q5DTM8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Gm44487-201ENSMUST00000205145 325 ntBASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf20Q5DTM8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf20Q5DTM8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf20Q5DTM8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf20Q5DTM8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf20Q5DTM8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf20Q5DTM8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf20Q5DTM8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rnf20Q5DTM8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf20Q5DTM8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf20Q5DTM8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms