Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn2bQ56A07 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.8□□□□□ -0.04
Scn2bQ56A07 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Gm13418-201ENSMUST00000119097 944 ntBASIC14.79□□□□□ -0.04
Scn2bQ56A07 Gm7862-201ENSMUST00000121461 292 ntBASIC14.79□□□□□ -0.04
Scn2bQ56A07 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.79□□□□□ -0.04
Scn2bQ56A07 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn2bQ56A07 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.78□□□□□ -0.04
Scn2bQ56A07 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn2bQ56A07 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.77□□□□□ -0.04
Scn2bQ56A07 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn2bQ56A07 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.77□□□□□ -0.05
Scn2bQ56A07 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.77□□□□□ -0.05
Scn2bQ56A07 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.77□□□□□ -0.05
Scn2bQ56A07 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn2bQ56A07 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms