Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gm42642-201ENSMUST00000200683 355 ntBASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks1brtQ3UNC9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1brtQ3UNC9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gm12085-201ENSMUST00000119263 940 ntBASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1brtQ3UNC9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm11249-201ENSMUST00000117071 859 ntBASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cks1brtQ3UNC9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms