Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.36■□□□□ 0.53
Vars2Q3U2A8 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gm8749-201ENSMUST00000117737 331 ntBASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Gm7287-201ENSMUST00000205267 602 ntBASIC18.35■□□□□ 0.53
Vars2Q3U2A8 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vars2Q3U2A8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Gm23931-201ENSMUST00000103842 109 ntBASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Gm17795-201ENSMUST00000214505 757 ntBASIC18.34■□□□□ 0.53
Vars2Q3U2A8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vars2Q3U2A8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vars2Q3U2A8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Gm5187-201ENSMUST00000117317 991 ntBASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vars2Q3U2A8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.33■□□□□ 0.52
Vars2Q3U2A8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vars2Q3U2A8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms