Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ebf1Q07802 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.16■□□□□ 0.02
Ebf1Q07802 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf1Q07802 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf1Q07802 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.15■□□□□ 0.02
Ebf1Q07802 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.15■□□□□ 0.02
Ebf1Q07802 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.15■□□□□ 0.02
Ebf1Q07802 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf1Q07802 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf1Q07802 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.14■□□□□ 0.01
Ebf1Q07802 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.14■□□□□ 0.01
Ebf1Q07802 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.14■□□□□ 0.01
Ebf1Q07802 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.14■□□□□ 0.01
Ebf1Q07802 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.14■□□□□ 0.01
Ebf1Q07802 Gm10154-201ENSMUST00000084445 354 ntBASIC15.14■□□□□ 0.01
Ebf1Q07802 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ebf1Q07802 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf1Q07802 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Gm10499-201ENSMUST00000174094 934 ntBASIC15.13■□□□□ 0.01
Ebf1Q07802 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.13■□□□□ 0.01
Ebf1Q07802 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf1Q07802 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms