Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox4Q06831 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox4Q06831 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.69□□□□□ -0.06
Sox4Q06831 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.69□□□□□ -0.06
Sox4Q06831 Rpph1-201ENSMUST00000175096 319 ntBASIC14.69□□□□□ -0.06
Sox4Q06831 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.69□□□□□ -0.06
Sox4Q06831 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox4Q06831 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox4Q06831 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox4Q06831 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox4Q06831 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.69□□□□□ -0.06
Sox4Q06831 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox4Q06831 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox4Q06831 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox4Q06831 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox4Q06831 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox4Q06831 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Gm6736-201ENSMUST00000166583 948 ntBASIC14.68□□□□□ -0.06
Sox4Q06831 Gm2756-201ENSMUST00000195851 400 ntBASIC14.68□□□□□ -0.06
Sox4Q06831 Gm20553-201ENSMUST00000204205 844 ntBASIC14.68□□□□□ -0.06
Sox4Q06831 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.68□□□□□ -0.06
Sox4Q06831 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.68□□□□□ -0.06
Sox4Q06831 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox4Q06831 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox4Q06831 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox4Q06831 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.67□□□□□ -0.06
Sox4Q06831 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox4Q06831 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.67□□□□□ -0.06
Sox4Q06831 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.67□□□□□ -0.06
Sox4Q06831 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox4Q06831 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox4Q06831 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox4Q06831 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox4Q06831 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox4Q06831 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox4Q06831 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms