Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.85□□□□□ -0.67
Hspg2Q05793 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hspg2Q05793 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hspg2Q05793 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm9797-201ENSMUST00000052902 613 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Olfr582-201ENSMUST00000098212 960 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm37166-201ENSMUST00000195473 2474 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.84□□□□□ -0.67
Hspg2Q05793 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hspg2Q05793 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.84□□□□□ -0.67
Hspg2Q05793 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.83□□□□□ -0.68
Hspg2Q05793 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm16476-201ENSMUST00000221544 139 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm9229-201ENSMUST00000222777 126 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm42900-201ENSMUST00000197184 2167 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 BC001981-202ENSMUST00000191393 1545 ntBASIC10.83□□□□□ -0.68
Hspg2Q05793 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hspg2Q05793 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.82□□□□□ -0.68
Hspg2Q05793 BC037039-201ENSMUST00000192003 2205 ntBASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm37466-201ENSMUST00000195692 652 ntBASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.82□□□□□ -0.68
Hspg2Q05793 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hspg2Q05793 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms