Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CiitaP79621 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Mir449b-201ENSMUST00000104833 80 ntBASIC16.18■□□□□ 0.18
CiitaP79621 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Gm13616-201ENSMUST00000120600 222 ntBASIC16.18■□□□□ 0.18
CiitaP79621 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CiitaP79621 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CiitaP79621 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CiitaP79621 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CiitaP79621 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.17■□□□□ 0.18
CiitaP79621 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.17■□□□□ 0.18
CiitaP79621 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.17■□□□□ 0.18
CiitaP79621 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.17■□□□□ 0.18
CiitaP79621 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.17■□□□□ 0.18
CiitaP79621 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CiitaP79621 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
CiitaP79621 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CiitaP79621 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.17■□□□□ 0.18
CiitaP79621 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CiitaP79621 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.16■□□□□ 0.18
CiitaP79621 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.16■□□□□ 0.18
CiitaP79621 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.16■□□□□ 0.18
CiitaP79621 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.16■□□□□ 0.18
CiitaP79621 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.16■□□□□ 0.18
CiitaP79621 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.16■□□□□ 0.18
CiitaP79621 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CiitaP79621 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.15■□□□□ 0.18
CiitaP79621 Gm25948-201ENSMUST00000175334 112 ntBASIC16.15■□□□□ 0.18
CiitaP79621 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CiitaP79621 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms