Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lrch1P62046 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrch1P62046 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lrch1P62046 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrch1P62046 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrch1P62046 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Lrch1P62046 Gm11425-201ENSMUST00000119608 498 ntBASIC17.52■□□□□ 0.4
Lrch1P62046 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.52■□□□□ 0.4
Lrch1P62046 Gm45453-201ENSMUST00000211758 853 ntBASIC17.52■□□□□ 0.4
Lrch1P62046 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.52■□□□□ 0.4
Lrch1P62046 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lrch1P62046 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.52■□□□□ 0.4
Lrch1P62046 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Gm9396-201ENSMUST00000076703 567 ntBASIC17.52■□□□□ 0.4
Lrch1P62046 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrch1P62046 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lrch1P62046 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.51■□□□□ 0.39
Lrch1P62046 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.51■□□□□ 0.39
Lrch1P62046 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.51■□□□□ 0.39
Lrch1P62046 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lrch1P62046 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Gm19220-201ENSMUST00000222682 803 ntBASIC17.51■□□□□ 0.39
Lrch1P62046 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.51■□□□□ 0.39
Lrch1P62046 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.51■□□□□ 0.39
Lrch1P62046 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lrch1P62046 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lrch1P62046 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrch1P62046 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lrch1P62046 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.5■□□□□ 0.39
Lrch1P62046 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.5■□□□□ 0.39
Lrch1P62046 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.5■□□□□ 0.39
Lrch1P62046 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.5■□□□□ 0.39
Lrch1P62046 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lrch1P62046 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Lrch1P62046 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lrch1P62046 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.49■□□□□ 0.39
Lrch1P62046 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Lrch1P62046 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Lrch1P62046 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.49■□□□□ 0.39
Lrch1P62046 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lrch1P62046 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms